Hi-C of Kogia sima DNA Zoo Sample2478 - SRA

SRX25629255: Hi-C of Kogia sima DNA Zoo Sample2478
1 ILLUMINA (NextSeq 550) run: 789,959 spots, 126.4M bases, 46.2Mb downloads

Design: Rao, Huntley et al., 2014

Submitted by: Baylor College of Medicine

Study: DNA Zoo

The DNA Zoo is a consortium focused on facilitating conservation efforts through the rapid generation and release of high-quality genomics resources.

Sample: Dwarf sperm whale

Library:

Name: HIC11108

Instrument: NextSeq 550

Strategy: Hi-C

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 789,959 spots, 126.4M bases, 46.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR30162084	789,959	126.4M	46.2Mb	2024-08-07

Supplemental Content

hypothetical protein EUGRSUZ_F04489 [Eucalyptus grandis]
hypothetical protein EUGRSUZ_F04489 [Eucalyptus grandis]
gi|2619121806|gb|KAK3428470.1||gnl| USX|Eucgr.F04489.1.p

Protein
hypothetical protein EUGRSUZ_F04486 [Eucalyptus grandis]
hypothetical protein EUGRSUZ_F04486 [Eucalyptus grandis]
gi|2619121803|gb|KAK3428467.1||gnl| USX|Eucgr.F04486.1.p

Protein
conserved hypothetical protein (plasmid) [[Bacillus thuringiensis] serovar konku...
conserved hypothetical protein (plasmid) [[Bacillus thuringiensis] serovar konkukian str. 97-27]
gi|56800376|gnl|jgilanl|pBT9727_007 AAW31043.1|

Protein
DNA topoisomerase (plasmid) [[Bacillus thuringiensis] serovar konkukian str. 97-...
DNA topoisomerase (plasmid) [[Bacillus thuringiensis] serovar konkukian str. 97-27]
gi|56800375|gnl|jgilanl|pBT9727_007 AAW31042.1|

Protein
PREDICTED: Gadus chalcogrammus cyclic AMP-responsive element-binding protein 1-l...
PREDICTED: Gadus chalcogrammus cyclic AMP-responsive element-binding protein 1-like (LOC130378004), transcript variant X1, mRNA
gi|2512247130|ref|XM_056584943.1|

Nucleotide

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SRA